LINC00254

Across TCGA patient cohorts, LINC00254 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,155 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00254-associated GO terms across cancer lineages are Methylation, Ribose phosphate biosynthetic process, and Virion assembly. Each is linked with LINC00254 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC00254-to-partner and partner-to-LINC00254 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Methylation grouped by LINC00254-low versus LINC00254-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00254→partner) and Y-score (partner→LINC00254) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Methylation →	+0.097	+0.113	<.001	<.001	3	9
STAD	Ribose phosphate biosynthetic process →	+0.106	+0.093	<.001	<.001	3	9
STAD	Virion assembly →	+0.098	+0.103	<.001	<.001	3	8
STAD	Protein-RNA complex organization →	+0.117	+0.099	<.001	<.001	3	8
STAD	Regulation of organelle assembly →	+0.098	+0.100	<.001	<.001	3	8
STAD	Mitochondrial gene expression →	+0.120	+0.107	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,155 associations by consensus.

Methylation by LINC00254 expression — STAD

Explore this box plot interactively →