LINC00229

Across TCGA patient cohorts, LINC00229 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,378 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00229-associated GO terms across cancer lineages are Camera-type eye morphogenesis, Regulation of lipid biosynthetic process, and Bone development. Each is linked with LINC00229 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC00229-to-partner and partner-to-LINC00229 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Camera-type eye morphogenesis grouped by LINC00229-low versus LINC00229-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00229→partner) and Y-score (partner→LINC00229) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Camera-type eye morphogenesis →	+0.042	+0.070	<.001	<.001	3	11
STAD	Regulation of lipid biosynthetic process →	+0.049	+0.066	<.001	<.001	3	10
STAD	Bone development →	+0.058	+0.075	<.001	<.001	3	10
STAD	Respiratory system development →	+0.064	+0.082	<.001	<.001	3	10
STAD	Osteoblast differentiation →	+0.064	+0.081	<.001	<.001	3	10
STAD	Negative regulation of kinase activity →	+0.071	+0.093	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,378 associations by consensus.

Camera-type eye morphogenesis by LINC00229 expression — STAD

Explore this box plot interactively →