LINC00052

Across TCGA patient cohorts, LINC00052 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,102 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00052-associated GO terms across cancer lineages are Protein-DNA complex assembly, Mitotic sister chromatid segregation, and Regulation of microtubule cytoskeleton organization. Each is linked with LINC00052 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC00052-to-partner and partner-to-LINC00052 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-DNA complex assembly grouped by LINC00052-low versus LINC00052-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00052→partner) and Y-score (partner→LINC00052) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein-DNA complex assembly →	+0.059	+0.091	<.001	<.001	3	11
STAD	Mitotic sister chromatid segregation →	+0.076	+0.077	<.001	<.001	3	11
STAD	Regulation of microtubule cytoskeleton organization →	+0.051	+0.061	<.001	<.001	3	11
STAD	Mitotic cell cycle checkpoint signaling →	+0.069	+0.080	<.001	<.001	3	11
STAD	DNA conformation change →	+0.066	+0.070	<.001	<.001	3	11
STAD	Cell cycle DNA replication →	+0.072	+0.062	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,102 associations by consensus.

Protein-DNA complex assembly by LINC00052 expression — STAD

Explore this box plot interactively →