LINC00029

Across TCGA patient cohorts, LINC00029 RNA expression is significantly associated with the RNA expression of many other genes, with 11,543 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC00029-associated genes across cancer lineages are LINC01056, LINC01749, and BHLHE23. Each is linked with LINC00029 in more than 23 cancer types. Because this analysis shows association rather than direction, both LINC00029-to-partner and partner-to-LINC00029 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00029 versus LINC01056 in THYM, with a Pearson correlation of 0.84.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00029→partner) and Y-score (partner→LINC00029) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	LINC01056 →	+0.933	+1.647	<.001	<.001	3	24
THYM	LINC01749 →	+0.642	+0.997	<.001	<.001	3	18
THYM	BHLHE23 →	+1.602	+1.352	<.001	<.001	3	12
KIRP	IGLV3-32 →	+0.546	+0.074	<.001	<.001	3	12
THYM	IGLL1 →	+3.259	+1.446	<.001	<.001	3	10
UCS	PVALEF →	+0.833	+0.078	.007	<.001	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,543 associations by consensus.

LINC00029 vs LINC01056 — THYM

Explore this scatter interactively →