LINC00029

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC00029 RNA differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of LINC00029’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where LINC00029 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC00029 is over-expressed in tumor.

LUSC, CHOL, and HNSC are the cancer types where LINC00029 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC00029 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllII,III,IV+0.016.0123view →
CHOLAllAll+0.052.0421view →
HNSCAllAll+0.025.0401view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

LINC00029–LUSC

Tumor-vs-normal expression box plot for LINC00029 RNA in LUSC.

Open the LUSC breakdown →

Exploration