LINC00029

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00029 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00029-associated genes across cancer lineages are CD8+ Tem. Each is linked with LINC00029 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00029-to-partner and partner-to-LINC00029 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD8+ Tem grouped by LINC00029-low versus LINC00029-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00029→partner) and Y-score (partner→LINC00029) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCD8+ Tem →+0.022+8.066<.001.00731
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

CD8+ Tem by LINC00029 expression — UCEC

Box plot of CD8+ Tem in LINC00029-low vs LINC00029-high samples in UCEC.

Explore this box plot interactively →

Exploration