LIN28AP2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIN28AP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,061 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LIN28AP2-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Regulation of DNA repair, and tRNA metabolic process. Each is linked with LIN28AP2 in more than 9 cancer types. Because this analysis shows association rather than direction, both LIN28AP2-to-partner and partner-to-LIN28AP2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LIN28AP2→partner) and Y-score (partner→LIN28AP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADPositive regulation of DNA metabolic process →+0.106+0.102<.001<.001310
STADRegulation of DNA repair →+0.104+0.098<.001<.001310
STADtRNA metabolic process →+0.112+0.111<.001<.001310
STADPositive regulation of intrinsic apoptotic signaling pathway →+0.098+0.079<.001<.00139
STADTranscription by RNA polymerase I →+0.116+0.102<.001<.00139
STADRNA modification →+0.105+0.103<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,061 associations by consensus.

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