LIMS4

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LIMS4 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of LIMS4’s most consistent transcriptional readouts.

The strongest signal is observed in stomach adenocarcinoma (STAD), where LIMS4 RNA is repressed in tumor relative to normal tissue. In most cancer types LIMS4 is over-expressed in tumor, although a few such as STAD show the opposite, repressed pattern.

STAD and KICH are the cancer types where LIMS4 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LIMS4 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
STADAllAll−0.010.0102view →
KICHAllAll+0.011.0381view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

LIMS4–STAD

Tumor-vs-normal expression box plot for LIMS4 RNA in STAD.

Open the STAD breakdown →

Exploration