LIMD1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIMD1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,656 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LIMD1-associated proteins across cancer lineages are KIAA1143, TASOR, and TOP2B. Each is linked with LIMD1 in more than 4 cancer types. Because this analysis shows association rather than direction, both LIMD1-to-partner and partner-to-LIMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LIMD1 versus KIAA1143 in BRCA, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIMD1→partner) and Y-score (partner→LIMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAKIAA1143 →+0.417+0.598<.001<.00135
COADTASOR →+0.252+0.388<.001.00235
GBMTOP2B →+0.410+0.504<.001<.00135
BRCAUSP4 →+0.198+0.383.005.00434
GBMQRICH1 →+0.211+0.461<.001<.00134
LSCCRBBP7 →+0.300+0.394.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,656 associations by consensus.

LIMD1 vs KIAA1143 — BRCA

Per-sample scatter of LIMD1 vs KIAA1143 in BRCA (Pearson r = 0.40).

Explore this scatter interactively →

Exploration