LIM2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIM2 protein abundance is significantly associated with the go_rna of many other GO terms, with 1 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LIM2-associated GO terms across cancer lineages are Epithelial cell fate commitment. Each is linked with LIM2 in more than 1 cancer types. Because this analysis shows association rather than direction, both LIM2-to-partner and partner-to-LIM2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Epithelial cell fate commitment grouped by LIM2-low versus LIM2-high in BRCA.

protein abundance associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LIM2→partner) and Y-score (partner→LIM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAEpithelial cell fate commitment →+0.085+5.923.003.00131
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

Epithelial cell fate commitment by LIM2 expression — BRCA

Box plot of Epithelial cell fate commitment in LIM2-low vs LIM2-high samples in BRCA.

Explore this box plot interactively →

Exploration