LGR4-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LGR4-AS1 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of LGR4-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where LGR4-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types LGR4-AS1 is over-expressed in tumor, although a few such as COAD and KIRC show the opposite, repressed pattern.

COAD, KIRC, and BRCA are the cancer types where LGR4-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LGR4-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−0.268<.0018view →
KIRCAllII,III,IV−0.143.0018view →
BRCAAllIII,IV−1.161<.0016view →
LUADAllAll+0.231<.0015view →
LIHCAllAll+0.048.0035view →
CHOLMaleAll+0.206.0264view →
THCAMaleIII,IV−0.452.0033view →
HNSCFemaleII,III,IV−0.110.0133view →
LUSCAllAll+0.065.0063view →
READAllAll−0.246.0342view →
UCECAllAll−0.205.0302view →
STADAllAll+0.097.0352view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

LGR4-AS1–COAD

Tumor-vs-normal expression box plot for LGR4-AS1 RNA in COAD.

Open the COAD breakdown →

Exploration