LGALSL

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LGALSL RNA expression is significantly associated with the protein abundance of many other proteins, with 19,393 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LGALSL-associated proteins across cancer lineages are SAMSN1_S107, ARHGAP4, and PRKCD. Each is linked with LGALSL in more than 5 cancer types. Because this analysis shows association rather than direction, both LGALSL-to-partner and partner-to-LGALSL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LGALSL versus SAMSN1_S107 in CCRCC, with a Pearson correlation of -0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LGALSL→partner) and Y-score (partner→LGALSL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCSAMSN1_S107 →-0.656-0.712.001<.00136
HNSCARHGAP4 →-0.470-1.217<.001<.00135
UCECPRKCD →-0.420-0.815<.001<.00135
LSCCARHGEF6_S225 →-0.637-0.730<.001<.00135
GBMRAC2 →-0.664-0.437<.001<.00135
GBMTNFAIP8 →-0.646-0.571<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,393 associations by consensus.

LGALSL vs SAMSN1_S107 — CCRCC

Per-sample scatter of LGALSL vs SAMSN1_S107 in CCRCC (Pearson r = -0.53).

Explore this scatter interactively →

Exploration