LETM1P2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LETM1P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,284 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LETM1P2-associated proteins across cancer lineages are ZSCAN18, RBMS3, and EPM2AIP1. Each is linked with LETM1P2 in more than 4 cancer types. Because this analysis shows association rather than direction, both LETM1P2-to-partner and partner-to-LETM1P2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LETM1P2 versus ZSCAN18 in GBM, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LETM1P2→partner) and Y-score (partner→LETM1P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMZSCAN18 →+0.478+0.752.001<.00135
UCECRBMS3 →+0.370+0.336.001.00533
GBMEPM2AIP1 →+0.302+0.848<.001<.00133
UCECHDGFL3 →+0.498+0.372.006.00524
GBMHECW2_S1042 →+1.040+1.295<.001<.00133
UCECCLPP →-0.295-0.314<.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,284 associations by consensus.

LETM1P2 vs ZSCAN18 — GBM

Per-sample scatter of LETM1P2 vs ZSCAN18 in GBM (Pearson r = 0.37).

Explore this scatter interactively →

Exploration