LCMT1-AS2

Across TCGA patient cohorts, LCMT1-AS2 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,654 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LCMT1-AS2-associated proteins across cancer lineages are LCMT1, NUDT16L1, and THUMPD1. Each is linked with LCMT1-AS2 in more than 4 cancer types. Because this analysis shows association rather than direction, both LCMT1-AS2-to-partner and partner-to-LCMT1-AS2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LCMT1-AS2 versus LCMT1 in BRCA, with a Pearson correlation of 0.55.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LCMT1-AS2→partner) and Y-score (partner→LCMT1-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	LCMT1 →	+0.428	+0.127	<.001	<.001	3	5
GBM	NUDT16L1 →	+0.325	+0.385	<.001	<.001	3	4
LUAD	THUMPD1 →	+0.347	+0.423	<.001	<.001	3	4
GBM	STAG2 →	+0.293	+0.339	.009	<.001	3	4
HNSC	HNRNPLL →	+0.297	+0.448	<.001	<.001	3	4
GBM	MFAP1 →	+0.244	+0.335	.002	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,654 associations by consensus.

LCMT1-AS2 vs LCMT1 — BRCA

Explore this scatter interactively →