Across TCGA patient cohorts, LCE3E RNA expression is significantly associated with the RNA expression of many other genes, with 8,149 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible LCE3E-associated genes across cancer lineages are LCE3D, CRCT1, and SPRR2B. Each is linked with LCE3E in more than 27 cancer types. Because this analysis shows association rather than direction, both LCE3E-to-partner and partner-to-LCE3E results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LCE3E→partner) and Y-score (partner→LCE3E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	LCE3D →	+5.217	+3.830	<.001	<.001	3	28
ESCA	CRCT1 →	+5.375	+3.564	<.001	<.001	3	22
HNSC	SPRR2B →	+4.184	+3.853	<.001	<.001	3	20
ESCA	SPRR2G →	+5.231	+3.626	<.001	<.001	3	20
ESCA	SPRR2E →	+6.892	+3.665	<.001	<.001	3	19
ESCA	SPRR3 →	+5.629	+2.419	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,149 associations by consensus.

Exploration

LCE3E survival (RNA) · tumor vs normal (RNA) · all LCE3E data types