LCE1F

Across TCGA patient cohorts, LCE1F RNA expression is significantly associated with the go_rna of many other GO terms, with 5,081 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible LCE1F-associated GO terms across cancer lineages are Intermediate filament bundle assembly, Oviduct development, and Lung secretory cell differentiation. Each is linked with LCE1F in more than 5 cancer types. Because this analysis shows association rather than direction, both LCE1F-to-partner and partner-to-LCE1F results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Intermediate filament bundle assembly grouped by LCE1F-low versus LCE1F-high in SKCM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LCE1F→partner) and Y-score (partner→LCE1F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Intermediate filament bundle assembly →	+0.171	+1.047	<.001	<.001	3	6
ESCA	Oviduct development →	-0.189	-0.924	<.001	<.001	3	6
ESCA	Lung secretory cell differentiation →	-0.118	-1.065	<.001	<.001	3	6
ESCA	Epidermal cell differentiation →	+0.054	+0.779	<.001	<.001	3	6
HNSC	Regulation of antimicrobial humoral response →	+0.078	+1.572	<.001	<.001	3	6
SKCM	Regulation of antimicrobial peptide production →	+0.178	+0.909	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,081 associations by consensus.

Intermediate filament bundle assembly by LCE1F expression — SKCM

Explore this box plot interactively →