Across TCGA patient cohorts, LCE1C mutation is significantly associated with the RNA expression of many other genes, with 253 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LCE1C-associated genes across cancer lineages are LINC01553, RNU6-222P, and RPL36AP55. Each is linked with LCE1C in more than 1 cancer types. Because this analysis shows association rather than direction, both LCE1C-to-partner and partner-to-LCE1C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LCE1C→partner) and Y-score (partner→LCE1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	LINC01553 →	+0.007	+3.330	.007	.004	3	2
STAD	RNU6-222P →	+0.728	+3.657	.001	.007	3	2
STAD	RPL36AP55 →	+0.285	+3.660	<.001	.007	3	2
STAD	COX6CP13 →	+0.321	+3.763	.006	.003	3	2
STAD	RNA5SP24 →	+0.564	+3.310	<.001	.004	3	2
LUSC	MIR5586 →	+0.214	+5.333	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 253 associations by consensus.

Exploration

LCE1C survival (RNA) · tumor vs normal (RNA) · all LCE1C data types