LARP4B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LARP4B protein abundance is significantly associated with the RNA expression of many other genes, with 12,442 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LARP4B-associated genes across cancer lineages are NUDT5, GTPBP4, and CDC123. Each is linked with LARP4B in more than 9 cancer types. Because this analysis shows association rather than direction, both LARP4B-to-partner and partner-to-LARP4B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LARP4B versus NUDT5 in HNSC, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LARP4B→partner) and Y-score (partner→LARP4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNUDT5 →+0.629+0.203.002.001310
BRCAGTPBP4 →+0.784+0.419<.001<.00139
BRCACDC123 →+0.621+0.386<.001<.00139
HNSCATP5F1C →+1.006+0.267<.001<.00139
HNSCSUV39H2 →+0.613+0.189.005.00438
HNSCRPP38 →+0.633+0.213<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,442 associations by consensus.

LARP4B vs NUDT5 — HNSC

Per-sample scatter of LARP4B vs NUDT5 in HNSC (Pearson r = 0.30).

Explore this scatter interactively →

Exploration