Across TCGA patient cohorts, LAPTM4A-DT RNA expression is significantly associated with the go_rna of many other GO terms, with 6,942 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LAPTM4A-DT-associated GO terms across cancer lineages are NADH dehydrogenase complex assembly, Mitochondrial respiratory chain complex assembly, and Nucleolar large rRNA transcription by RNA polymerase I. Each is linked with LAPTM4A-DT in more than 19 cancer types. Because this analysis shows association rather than direction, both LAPTM4A-DT-to-partner and partner-to-LAPTM4A-DT results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LAPTM4A-DT→partner) and Y-score (partner→LAPTM4A-DT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	NADH dehydrogenase complex assembly →	+0.058	+0.182	<.001	<.001	3	20
STAD	Mitochondrial respiratory chain complex assembly →	+0.059	+0.177	<.001	<.001	3	20
STAD	Nucleolar large rRNA transcription by RNA polymerase I →	+0.048	+0.170	<.001	<.001	3	20
STAD	Mitochondrial translation →	+0.063	+0.180	<.001	<.001	3	19
STAD	Negative regulation of DNA-templated transcription, elongation →	+0.060	+0.174	<.001	<.001	3	19
ESCA	mRNA 3'-splice site recognition →	+0.048	+0.186	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,942 associations by consensus.

Exploration

LAPTM4A-DT survival (RNA) · tumor vs normal (RNA) · all LAPTM4A-DT data types