LAMA4-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LAMA4-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of LAMA4-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where LAMA4-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LAMA4-AS1 is over-expressed in tumor, although a few such as LUSC and BLCA show the opposite, repressed pattern.

KIRC, LUSC, and BLCA are the cancer types where LAMA4-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LAMA4-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleAll+0.161<.00111view →
LUSCFemaleII,III,IV−0.314<.0019view →
BLCAAllAll−0.407.0028view →
HNSCFemaleIII,IV+0.051.0087view →
UCECAllAll−0.385<.0016view →
BRCAAllIII,IV−0.224<.0016view →
LUADFemaleIII,IV−0.234<.0013view →
PRADAllAll−0.112<.0012view →
CHOLAllAll+0.100.0042view →
LIHCAllAll+0.011.0332view →
READFemaleAll−0.174.0391view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

Exploration