KRTAP9-4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRTAP9-4 mutation is significantly associated with the total protein of many other genes, with 14 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRTAP9-4-associated genes across cancer lineages are Rab25, MIG-6, and MSH2. Each is linked with KRTAP9-4 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP9-4-to-partner and partner-to-KRTAP9-4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Rab25 grouped by KRTAP9-4-low versus KRTAP9-4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP9-4→partner) and Y-score (partner→KRTAP9-4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRab25 →-0.482-3.321.005.01032
UCECMIG-6 →+0.126+2.183.015.03531
UCECMSH2 →-0.266-2.990.027.03631
UCECN-Cadherin →+0.290+2.817.008.03631
UCECNotch1 →+0.225+2.817.002.03631
UCECVHL →-0.955-3.000.007.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

Rab25 by KRTAP9-4 expression — UCEC

Box plot of Rab25 in KRTAP9-4-low vs KRTAP9-4-high samples in UCEC.

Explore this box plot interactively →

Exploration