KRTAP9-4

Across TCGA cell cohorts, KRTAP9-4 RNA expression is significantly associated with the mutation status of many other genes, with 24 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible KRTAP9-4-associated genes across cancer lineages are N4BP2, CSK, and BNC1. Each is linked with KRTAP9-4 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP9-4-to-partner and partner-to-KRTAP9-4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, N4BP2 grouped by KRTAP9-4-low versus KRTAP9-4-high in LUNG_SCLC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP9-4→partner) and Y-score (partner→KRTAP9-4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	N4BP2 →	+4.643	+0.020	.004	<.001	3	1
STOMACH	CSK →	+5.285	+0.040	.003	<.001	3	1
STOMACH	BNC1 →	+4.285	+0.030	.007	<.001	3	1
STOMACH	RUFY3 →	+5.285	+0.040	.003	<.001	3	1
STOMACH	CHEK2 →	+4.285	+0.030	.007	<.001	3	1
STOMACH	GALT →	+5.285	+0.040	.003	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

N4BP2 by KRTAP9-4 expression — LUNG_SCLC

Explore this box plot interactively →