KRTAP5-3

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KRTAP5-3 RNA expression is significantly associated with the mutation status of many other genes, with 96 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KRTAP5-3-associated genes across cancer lineages are GRIK4, WSCD1, and CTR9. Each is linked with KRTAP5-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP5-3-to-partner and partner-to-KRTAP5-3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP5-3→partner) and Y-score (partner→KRTAP5-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASGRIK4 →+5.000+0.035.006<.00132
LUNG_NSCLC_LUSCWSCD1 →+4.643+0.076.008<.00132
LUNG_NSCLC_LUSCCTR9 →+4.643+0.076.008<.00132
LUNG_NSCLC_LUSCPAG1 →+4.643+0.076.008<.00132
BLOOD_LeukemiaTDRD9 →+3.185+0.011.006.00732
BLOOD_LymphomaGREB1 →+2.616+0.019.008.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 96 associations by consensus.

Exploration