KRTAP2-2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRTAP2-2 mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRTAP2-2-associated genes across cancer lineages are IGKV2OR2-10, TERF1P1, and OR12D2. Each is linked with KRTAP2-2 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP2-2-to-partner and partner-to-KRTAP2-2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP2-2→partner) and Y-score (partner→KRTAP2-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIGKV2OR2-10 →+0.198+4.937<.001.00531
UCECTERF1P1 →+0.080+4.484<.001.00931
UCECOR12D2 →+0.040+4.771.004.00631
UCECMIR425 →+0.634+4.499.007.00531
UCECRNU6-1233P →+0.477+5.722.009.00131
UCECRNU6-1082P →+0.441+4.551<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

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