KRTAP19-3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRTAP19-3 mutation is significantly associated with the RNA expression of many other genes, with 1,485 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRTAP19-3-associated genes across cancer lineages are MIR7702, PPIAP24, and OR5B17. Each is linked with KRTAP19-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP19-3-to-partner and partner-to-KRTAP19-3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR7702 grouped by KRTAP19-3-low versus KRTAP19-3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP19-3→partner) and Y-score (partner→KRTAP19-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR7702 →+0.309+4.738<.001.00232
HNSCPPIAP24 →+0.181+4.240<.001.00332
HNSCOR5B17 →+0.040+4.636.001.00632
LUADRPSAP23 →+0.069+4.399.001.00632
HNSCNDUFA5P4 →+0.070+4.526<.001.00732
UCECRNA5SP408 →+0.308+3.186.005.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,485 associations by consensus.

MIR7702 by KRTAP19-3 expression — UCEC

Box plot of MIR7702 in KRTAP19-3-low vs KRTAP19-3-high samples in UCEC.

Explore this box plot interactively →

Exploration