KRTAP19-3

Across TCGA cell cohorts, KRTAP19-3 RNA expression is significantly associated with the mutation status of many other genes, with 136 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible KRTAP19-3-associated genes across cancer lineages are NCOA1, POLRMT, and ZSCAN12. Each is linked with KRTAP19-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP19-3-to-partner and partner-to-KRTAP19-3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NCOA1 grouped by KRTAP19-3-low versus KRTAP19-3-high in LUNG_SCLC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP19-3→partner) and Y-score (partner→KRTAP19-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	NCOA1 →	+4.614	+0.267	<.001	<.001	3	2
BLOOD_Lymphoma	POLRMT →	+4.247	+0.036	.004	<.001	3	2
LUNG_NSCLC_LUAD	ZSCAN12 →	+5.228	+0.132	.005	<.001	3	2
CNS	ALG13 →	+5.321	+0.071	.005	<.001	3	2
CNS	KAT6B →	+4.321	+0.060	.009	<.001	3	2
BLOOD_Myeloma	CELSR2 →	+4.807	+0.236	.006	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 136 associations by consensus.

NCOA1 by KRTAP19-3 expression — LUNG_SCLC

Explore this box plot interactively →