KRTAP13-1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KRTAP13-1 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KRTAP13-1-associated genes across cancer lineages are IL9, SPINT4, and DYDC1. Each is linked with KRTAP13-1 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP13-1-to-partner and partner-to-KRTAP13-1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP13-1→partner) and Y-score (partner→KRTAP13-1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADIL9 →+0.071+5.228<.001.00531
LUNG_NSCLC_LUADSPINT4 →+0.058+5.228<.001.00531
LUNG_NSCLC_LUADDYDC1 →+0.041+5.228<.001.00531
LUNG_NSCLC_LUADOR4F4 →+0.006+4.887.009.00931
LARGE_INTESTINECUEDC2 →+0.625+3.064.004.00931
LARGE_INTESTINETEX101 →+0.154+3.708<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

Exploration