KRTAP10-1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRTAP10-1 mutation is significantly associated with the RNA expression of many other genes, with 177 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible KRTAP10-1-associated genes across cancer lineages are LINC02676, TIMM9P1, and LINC00709. Each is linked with KRTAP10-1 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP10-1-to-partner and partner-to-KRTAP10-1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRTAP10-1→partner) and Y-score (partner→KRTAP10-1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADLINC02676 →+0.226+7.741<.001.00932
SKCMTIMM9P1 →+0.145+3.242<.001.00832
LUADLINC00709 →+0.079+7.930<.001.00832
UCECSNORD114-18 →+0.541+3.299<.001.00632
UCECRNU6-1156P →+0.721+3.515<.001<.00132
UCECRFC3P1 →+0.124+3.771<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 177 associations by consensus.

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