Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts
Across TCGA patient cohorts, KRTAP1-3 mutation is significantly associated with the RNA expression of many other genes, with 110 significant associations in total. SKCM shows the largest number of these associations.
The most reproducible KRTAP1-3-associated genes across cancer lineages are RDM1P1, MIR4445, and NMTRQ-TTG12-1. Each is linked with KRTAP1-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRTAP1-3-to-partner and partner-to-KRTAP1-3 results are reported.
Each partner links to its own Q-omics profile.
mutation associated genes by consensus
Ranked by combined sampling and lineage consensus. X-score (KRTAP1-3→partner) and Y-score (partner→KRTAP1-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.