KRT84

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KRT84 mutation is significantly associated with the RNA expression of many other genes, with 166 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KRT84-associated genes across cancer lineages are OPN1MW, HMGXB4, and BLOC1S6. Each is linked with KRT84 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRT84-to-partner and partner-to-KRT84 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OPN1MW grouped by KRT84-low versus KRT84-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT84→partner) and Y-score (partner→KRT84) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOPN1MW →+0.016+4.415.001.00731
LARGE_INTESTINEHMGXB4 →+0.579+3.364.003.00231
LARGE_INTESTINEBLOC1S6 →+0.457+3.364.005.00231
LARGE_INTESTINEFAM149A →+1.225+3.364.002.00231
LARGE_INTESTINEB3GAT2 →+0.209+3.364.001.00231
LARGE_INTESTINETTC33 →+0.662+3.169.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 166 associations by consensus.

OPN1MW by KRT84 expression — SKIN

Box plot of OPN1MW in KRT84-low vs KRT84-high samples in SKIN.

Explore this box plot interactively →

Exploration