KRT18P55

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRT18P55 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRT18P55-associated genes across cancer lineages are TRGJP2, TRGJP1, and MIR320C2. Each is linked with KRT18P55 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRT18P55-to-partner and partner-to-KRT18P55 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRGJP2 grouped by KRT18P55-low versus KRT18P55-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT18P55→partner) and Y-score (partner→KRT18P55) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTRGJP2 →+1.220+4.473<.001.00531
UCECTRGJP1 →+2.065+4.969<.001.00231
UCECMIR320C2 →+0.866+4.694<.001.00731
UCECRNU6-316P →+0.555+5.123<.001.00431
UCECRNU2-28P →+0.602+4.233.002.00931
UCECLINC02144 →+0.198+4.852<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

TRGJP2 by KRT18P55 expression — UCEC

Box plot of TRGJP2 in KRT18P55-low vs KRT18P55-high samples in UCEC.

Explore this box plot interactively →

Exploration