KRT18

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRT18 protein abundance is significantly associated with the RNA expression of many other genes, with 12,959 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible KRT18-associated genes across cancer lineages are KRT8, KRT18P28, and SLC25A21. Each is linked with KRT18 in more than 8 cancer types. Because this analysis shows association rather than direction, both KRT18-to-partner and partner-to-KRT18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KRT18 versus KRT8 in HNSC, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT18→partner) and Y-score (partner→KRT18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCKRT8 →+2.014+0.561<.001<.00139
BRCAKRT18P28 →+0.650+0.722.008.00136
HNSCSLC25A21 →+0.535+0.560<.001<.00135
COADKRT18P11 →+0.719+0.555<.001<.00135
PDACKRT87P →+0.906+0.591<.001<.00135
UCECSLC44A3 →+1.175+0.394<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,959 associations by consensus.

KRT18 vs KRT8 — HNSC

Per-sample scatter of KRT18 vs KRT8 in HNSC (Pearson r = 0.52).

Explore this scatter interactively →

Exploration