KRT18

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KRT18 mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KRT18-associated genes across cancer lineages are Myosin-IIa_pS1943, PDCD4, and Rab25. Each is linked with KRT18 in more than 1 cancer types. Because this analysis shows association rather than direction, both KRT18-to-partner and partner-to-KRT18 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Myosin-IIa_pS1943 grouped by KRT18-low versus KRT18-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KRT18→partner) and Y-score (partner→KRT18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMyosin-IIa_pS1943 →+0.295+3.013.013.01931
UCECPDCD4 →-0.564-3.000.038.03731
UCECRab25 →-0.586-3.000.002.03731
UCECp62 Lck ligand →+0.373+3.000.047.03711
UCECPCNA →+0.323+3.000.009.03711
UCECRad50 →-0.306-3.000.029.03711
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

Myosin-IIa_pS1943 by KRT18 expression — UCEC

Box plot of Myosin-IIa_pS1943 in KRT18-low vs KRT18-high samples in UCEC.

Explore this box plot interactively →

Exploration