KREMEN2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KREMEN2 mutation is significantly associated with the RNA expression of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KREMEN2-associated genes across cancer lineages are MIR6766, RNU6-281P, and OR4K3. Each is linked with KREMEN2 in more than 1 cancer types. Because this analysis shows association rather than direction, both KREMEN2-to-partner and partner-to-KREMEN2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6766 grouped by KREMEN2-low versus KREMEN2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KREMEN2→partner) and Y-score (partner→KREMEN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6766 →+0.832+5.358<.001.00631
SKCMRNU6-281P →+0.373+7.816<.001.00831
UCECOR4K3 →+0.140+5.081<.001.00831
UCECMIR4747 →+0.982+5.133<.001.00831
UCECMIR5588 →+0.968+5.081<.001.00831
UCECRN7SKP204 →+0.761+4.982<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

MIR6766 by KREMEN2 expression — UCEC

Box plot of MIR6766 in KREMEN2-low vs KREMEN2-high samples in UCEC.

Explore this box plot interactively →

Exploration