KLHL4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHL4 protein abundance is significantly associated with the RNA expression of many other genes, with 1,955 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KLHL4-associated genes across cancer lineages are NECTIN4, F11R, and GOLGA2P7. Each is linked with KLHL4 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHL4-to-partner and partner-to-KLHL4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLHL4 versus NECTIN4 in UCEC, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHL4→partner) and Y-score (partner→KLHL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNECTIN4 →-0.861-0.365.007.00532
UCECF11R →-0.714-0.609.003<.00132
UCECGOLGA2P7 →-0.431-0.474.003.00732
UCECIGSF9 →-1.532-0.562.002.00432
LUADGJA3 →-0.202-0.303.002.00831
LUADLDHA →+0.464+0.371.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,955 associations by consensus.

KLHL4 vs NECTIN4 — UCEC

Per-sample scatter of KLHL4 vs NECTIN4 in UCEC (Pearson r = -0.46).

Explore this scatter interactively →

Exploration