KLHDC9

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHDC9 protein abundance is significantly associated with the RNA expression of many other genes, with 1,461 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible KLHDC9-associated genes across cancer lineages are GSTM3, FOXL1, and SLCO1A2. Each is linked with KLHDC9 in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHDC9-to-partner and partner-to-KLHDC9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLHDC9 versus GSTM3 in BRCA, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHDC9→partner) and Y-score (partner→KLHDC9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGSTM3 →+1.909+0.980.009.00132
BRCAFOXL1 →-0.690-0.917.005.00432
GBMSLCO1A2 →+1.059+0.341.006.00532
CCRCCNABP2 →-0.619-0.920.008.00632
BRCAMPP2 →+1.182+0.686<.001.00232
BRCAPEX7 →+1.176+1.122<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,461 associations by consensus.

KLHDC9 vs GSTM3 — BRCA

Per-sample scatter of KLHDC9 vs GSTM3 in BRCA (Pearson r = 0.50).

Explore this scatter interactively →

Exploration