KLHDC8A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, KLHDC8A mutation is significantly associated with the RNA expression of many other genes, with 19 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible KLHDC8A-associated genes across cancer lineages are KRT6C, H2BC1, and H2AC1. Each is linked with KLHDC8A in more than 1 cancer types. Because this analysis shows association rather than direction, both KLHDC8A-to-partner and partner-to-KLHDC8A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRT6C grouped by KLHDC8A-low versus KLHDC8A-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHDC8A→partner) and Y-score (partner→KLHDC8A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEKRT6C →+0.013+4.930<.001.00832
SOFT_TISSUEH2BC1 →+0.433+5.977<.001.00131
SOFT_TISSUEH2AC1 →+0.193+5.977<.001.00131
SOFT_TISSUEKRTAP10-1 →+0.034+5.369.002.00431
SOFT_TISSUEGAGE12E →+0.090+4.930<.001.00831
SOFT_TISSUEIFNA14 →+0.032+5.369<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

KRT6C by KLHDC8A expression — SOFT_TISSUE

Box plot of KRT6C in KLHDC8A-low vs KLHDC8A-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration