KLHDC4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLHDC4 protein abundance is significantly associated with the RNA expression of many other genes, with 6,808 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible KLHDC4-associated genes across cancer lineages are REL, DGKH, and TMEM30A. Each is linked with KLHDC4 in more than 3 cancer types. Because this analysis shows association rather than direction, both KLHDC4-to-partner and partner-to-KLHDC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLHDC4 versus REL in OV, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLHDC4→partner) and Y-score (partner→KLHDC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVREL →-0.613-0.516.006.00434
COADDGKH →-0.689-0.496.003.00134
OVTMEM30A →-0.620-0.592.001.00433
OVTRAK2 →-0.588-0.613.007.00933
OVSLC13A4 →-0.643-0.570.009.00733
OVPXK →-0.656-0.577<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,808 associations by consensus.

KLHDC4 vs REL — OV

Per-sample scatter of KLHDC4 vs REL in OV (Pearson r = -0.38).

Explore this scatter interactively →

Exploration