KLF6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLF6 mutation is significantly associated with the RNA expression of many other genes, with 756 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KLF6-associated genes across cancer lineages are RNU6-591P, OR6F1, and RNA5SP161. Each is linked with KLF6 in more than 2 cancer types. Because this analysis shows association rather than direction, both KLF6-to-partner and partner-to-KLF6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-591P grouped by KLF6-low versus KLF6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLF6→partner) and Y-score (partner→KLF6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-591P →+0.120+4.896<.001.00133
LUADOR6F1 →+0.081+5.631<.001.00432
UCECRNA5SP161 →+0.901+1.943<.001.00232
LUADOR6L1P →+0.204+5.798<.001.00332
LUADTIMM8BP1 →+0.709+5.984<.001.00232
LUADNANOGP3 →+0.248+7.599<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 756 associations by consensus.

RNU6-591P by KLF6 expression — UCEC

Box plot of RNU6-591P in KLF6-low vs KLF6-high samples in UCEC.

Explore this box plot interactively →

Exploration