KLF3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLF3 protein abundance is significantly associated with the RNA expression of many other genes, with 8,615 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KLF3-associated genes across cancer lineages are ITGAX, VSIG10, and CLEC5A. Each is linked with KLF3 in more than 4 cancer types. Because this analysis shows association rather than direction, both KLF3-to-partner and partner-to-KLF3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLF3 versus ITGAX in HNSC, with a Pearson correlation of -0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLF3→partner) and Y-score (partner→KLF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCITGAX →-0.756-0.652<.001<.00134
BRCAVSIG10 →+0.559+0.409<.001<.00134
LUADCLEC5A →-0.762-0.235.001<.00134
HNSCSP140 →-0.788-0.393<.001.00434
HNSCSUDS3P1 →+0.539+0.409.001.00534
LSCCRMND5A →+0.710+0.290<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,615 associations by consensus.

KLF3 vs ITGAX — HNSC

Per-sample scatter of KLF3 vs ITGAX in HNSC (Pearson r = -0.42).

Explore this scatter interactively →

Exploration