KLB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KLB protein abundance is significantly associated with the RNA expression of many other genes, with 36 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KLB-associated genes across cancer lineages are RGS4, CCN2, and TNFSF9. Each is linked with KLB in more than 1 cancer types. Because this analysis shows association rather than direction, both KLB-to-partner and partner-to-KLB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KLB versus RGS4 in GBM, with a Pearson correlation of -0.86.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KLB→partner) and Y-score (partner→KLB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRGS4 →-2.921-0.690.005.00531
GBMCCN2 →-1.502-0.690.007.00531
GBMTNFSF9 →-0.857-0.690.008.00531
GBMZFP36 →-1.731-0.690.003.00531
GBMISLR →-2.061-0.690.004.00531
GBMBCL2A1 →-1.512-0.690.005.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 36 associations by consensus.

KLB vs RGS4 — GBM

Per-sample scatter of KLB vs RGS4 in GBM (Pearson r = -0.86).

Explore this scatter interactively →

Exploration