KIFC3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KIFC3 mutation is significantly associated with the RNA expression of many other genes, with 2,960 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KIFC3-associated genes across cancer lineages are PRICKLE2, HMGB2, and SFXN1. Each is linked with KIFC3 in more than 2 cancer types. Because this analysis shows association rather than direction, both KIFC3-to-partner and partner-to-KIFC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRICKLE2 grouped by KIFC3-low versus KIFC3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KIFC3→partner) and Y-score (partner→KIFC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRICKLE2 →-0.480-1.983.001.00233
UCECHMGB2 →+0.570+3.021.001<.00133
UCECSFXN1 →+0.461+1.947<.001<.00133
UCECLEO1 →+0.391+2.695.001<.00133
UCECPRDX2 →+0.532+1.979<.001<.00133
UCECTYMSOS →+0.834+4.332<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,960 associations by consensus.

PRICKLE2 by KIFC3 expression — UCEC

Box plot of PRICKLE2 in KIFC3-low vs KIFC3-high samples in UCEC.

Explore this box plot interactively →

Exploration