KDM5D

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KDM5D RNA expression is significantly associated with the go_rna of many other GO terms, with 6,605 significant associations in total. PRAD shows the largest number of these associations.

The most reproducible KDM5D-associated GO terms across cancer lineages are Sequestering of actin monomers, lncRNA-mediated post-transcriptional gene silencing, and Regulation of miRNA catabolic process. Each is linked with KDM5D in more than 18 cancer types. Because this analysis shows association rather than direction, both KDM5D-to-partner and partner-to-KDM5D results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM5D→partner) and Y-score (partner→KDM5D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LAMLSequestering of actin monomers →-0.088-2.611<.001<.001319
GBMlncRNA-mediated post-transcriptional gene silencing →+0.074+1.416<.001<.001316
GBMRegulation of miRNA catabolic process →+0.064+1.144<.001<.001313
PRADPositive regulation of autophagy →+0.030+0.520<.001<.001312
GBMSex-chromosome dosage compensation →+0.048+1.260<.001.001213
TGCTCOPI-coated vesicle budding →+0.052+0.694<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,605 associations by consensus.

Exploration