KDM5B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KDM5B RNA expression is significantly associated with the protein abundance of many other proteins, with 14,840 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KDM5B-associated proteins across cancer lineages are BROX, DHX9, and GATAD2B. Each is linked with KDM5B in more than 6 cancer types. Because this analysis shows association rather than direction, both KDM5B-to-partner and partner-to-KDM5B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KDM5B versus BROX in LSCC, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM5B→partner) and Y-score (partner→KDM5B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCBROX →+0.432+0.647<.001<.00137
LSCCDHX9 →+0.240+0.717<.001<.00137
GBMGATAD2B →+0.348+0.425<.001<.00137
LUADIPO9 →+0.412+0.690<.001<.00136
GBMKDM1A →+0.289+0.309<.001<.00136
HNSCPOGK →+0.410+0.536<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,840 associations by consensus.

KDM5B vs BROX — LSCC

Per-sample scatter of KDM5B vs BROX in LSCC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration