KDM2B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KDM2B protein abundance is significantly associated with the RNA expression of many other genes, with 11,676 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KDM2B-associated genes across cancer lineages are NCAPD2, FOXM1, and KIF14. Each is linked with KDM2B in more than 4 cancer types. Because this analysis shows association rather than direction, both KDM2B-to-partner and partner-to-KDM2B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KDM2B versus NCAPD2 in HNSC, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM2B→partner) and Y-score (partner→KDM2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNCAPD2 →+0.943+0.252<.001<.00135
GBMFOXM1 →+0.827+0.311<.001<.00135
GBMKIF14 →+0.859+0.332<.001<.00135
GBMHELLS →+0.798+0.401<.001<.00135
HNSCCCDC77 →+0.541+0.213<.001<.00135
HNSCDESI2 →+0.634+0.260<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,676 associations by consensus.

KDM2B vs NCAPD2 — HNSC

Per-sample scatter of KDM2B vs NCAPD2 in HNSC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration