KDM2B

Across TCGA cell cohorts, KDM2B RNA expression is significantly associated with the go_rna of many other GO terms, with 5,446 significant associations in total. BONE shows the largest number of these associations.

The most reproducible KDM2B-associated GO terms across cancer lineages are Third ventricle development, Rostrocaudal neural tube patterning, and Regulation of DNA repair. Each is linked with KDM2B in more than 18 cancer types. Because this analysis shows association rather than direction, both KDM2B-to-partner and partner-to-KDM2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Third ventricle development grouped by KDM2B-low versus KDM2B-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM2B→partner) and Y-score (partner→KDM2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Third ventricle development →	+0.202	+1.016	<.001	<.001	3	19
BONE	Rostrocaudal neural tube patterning →	+0.172	+1.076	<.001	<.001	3	19
BONE	Regulation of DNA repair →	+0.066	+0.847	<.001	<.001	3	17
BONE	Positive regulation of DNA metabolic process →	+0.072	+0.788	<.001	<.001	3	16
BONE	Regulation of double-strand break repair via homologous recombination →	+0.102	+1.114	.007	.002	3	16
LUNG_NSCLC_LUSC	Regulation of double-strand break repair →	+0.075	+0.794	<.001	.006	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,446 associations by consensus.

Third ventricle development by KDM2B expression — STOMACH

Explore this box plot interactively →