KDM2B-DT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KDM2B-DT RNA expression is significantly associated with the protein abundance of many other proteins, with 10,362 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KDM2B-DT-associated proteins across cancer lineages are PSIP1, SART3, and HNRNPA3. Each is linked with KDM2B-DT in more than 4 cancer types. Because this analysis shows association rather than direction, both KDM2B-DT-to-partner and partner-to-KDM2B-DT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KDM2B-DT versus PSIP1 in GBM, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM2B-DT→partner) and Y-score (partner→KDM2B-DT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPSIP1 →+0.487+0.570<.001<.00135
GBMSART3 →+0.254+0.523.001.00235
HNSCHNRNPA3 →+0.293+0.501<.001<.00135
HNSCTNKS1BP1 →-0.327-0.492<.001.00135
HNSCRPRD2 →+0.256+0.548.002.00534
LSCCFUS →+0.353+0.485<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,362 associations by consensus.

KDM2B-DT vs PSIP1 — GBM

Per-sample scatter of KDM2B-DT vs PSIP1 in GBM (Pearson r = 0.34).

Explore this scatter interactively →

Exploration