KDM1A

Across TCGA patient cohorts, KDM1A RNA expression is significantly associated with the protein abundance of many other proteins, with 19,177 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KDM1A-associated proteins across cancer lineages are RCC2, STMN1, and PPP1R8. Each is linked with KDM1A in more than 8 cancer types. Because this analysis shows association rather than direction, both KDM1A-to-partner and partner-to-KDM1A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KDM1A versus RCC2 in LSCC, with a Pearson correlation of 0.77.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KDM1A→partner) and Y-score (partner→KDM1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RCC2 →	+0.484	+0.605	<.001	<.001	3	9
OV	STMN1 →	+0.562	+0.610	.002	<.001	3	7
GBM	PPP1R8 →	+0.240	+0.532	<.001	<.001	3	7
LSCC	SPEN →	+0.225	+0.613	<.001	<.001	3	6
LSCC	MTA1 →	+0.438	+0.728	<.001	<.001	3	6
LSCC	MTA1_S576 →	+0.933	+0.683	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,177 associations by consensus.

KDM1A vs RCC2 — LSCC

Explore this scatter interactively →