KCTD13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCTD13 protein abundance is significantly associated with the RNA expression of many other genes, with 255 significant associations in total. GBM shows the largest number of these associations.

The most reproducible KCTD13-associated genes across cancer lineages are BIRC6, MKX, and PRKAA2. Each is linked with KCTD13 in more than 1 cancer types. Because this analysis shows association rather than direction, both KCTD13-to-partner and partner-to-KCTD13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCTD13 versus BIRC6 in LSCC, with a Pearson correlation of -0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCTD13→partner) and Y-score (partner→KCTD13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCBIRC6 →-0.408-0.255.002.00831
LSCCMKX →-0.856-0.214<.001.00631
LSCCPRKAA2 →-2.215-0.306<.001.00431
LSCCDEUP1 →-0.768-0.215.006.00631
LSCCRPS10P2 →-1.424-0.278.001.00831
LSCCDUTP1 →-0.956-0.294.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 255 associations by consensus.

KCTD13 vs BIRC6 — LSCC

Per-sample scatter of KCTD13 vs BIRC6 in LSCC (Pearson r = -0.36).

Explore this scatter interactively →

Exploration