KCNMB2-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, KCNMB2-AS1 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of KCNMB2-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where KCNMB2-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types KCNMB2-AS1 is over-expressed in tumor, although a few such as KICH show the opposite, repressed pattern.

HNSC, COAD, and THCA are the cancer types where KCNMB2-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in KCNMB2-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+2.477<.00112view →
COADAllAll+0.931<.00110view →
THCAAllIII,IV+0.427<.0019view →
LUSCFemaleAll+4.027<.0018view →
BLCAAllAll+1.744<.0018view →
LUADMaleAll+1.573<.0018view →
LIHCAllII,III,IV+1.040<.0018view →
UCECAllIII,IV+2.447<.0016view →
STADAllII,III,IV+1.129<.0016view →
KIRCAllAll+0.169.0076view →
READAllAll+1.463<.0015view →
BRCAAllII,III,IV+0.473<.0014view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

KCNMB2-AS1–HNSC

Tumor-vs-normal expression box plot for KCNMB2-AS1 RNA in HNSC.

Open the HNSC breakdown →

Exploration